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The Australian pacer underwent surgery after the recurrence of his hamstring injury last week.
Chris Woakes' 44 was the highest individual score in England's abject second innings batting display, while Jos Buttler resisted for a while with a dogged 26 off 207 balls.
Opener David Warner has been cleared to play against England in the day-night Test at the Adelaide Oval.
The 24-year-old, who has played two Tests, 13 ODIs and 14 T20Is for Australia, was bought for a whopping Rs 14 crore by Punjab Kings at the IPL auction.
The 22-year-old will be replaced by namesake Kane Richardson after failing to recover from a shoulder dislocation he suffered playing against Pakistan in March.